[Fwd: Re: Serious GDCMImageIO bug in 3.16]

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[Fwd: Re: Serious GDCMImageIO bug in 3.16]

pieper
Administrator
FYI - a dicom exporting bug has been fixed in ITK 3.16.  Developers
should update ITK either directly with cvs or with the --update argument
to getbuildtest.  Nightly builds automatically track changes in the ITK
release branch.

-Steve

-------- Original Message --------
Subject: Re: Serious GDCMImageIO bug in 3.16
Date: Wed, 2 Dec 2009 16:02:18 -0500
From: Bill Lorensen <[hidden email]>
To: Luis Ibanez <[hidden email]>, Steve Pieper
<[hidden email]>
References:
<[hidden email]>
<[hidden email]>

Steve,

You may want to tell slicer developers to update their ITK 3.16.

Bill

On Wed, Dec 2, 2009 at 3:20 PM, Luis Ibanez <[hidden email]> wrote:

> Hi Bill,
>
> Thanks for the heads up.
>
> I logged the issue as an ITK 3.16 bug, under entry:
>
>   http://www.cmake.org/Bug/view.php?id=9993
>
> and committed the equivalent patch in the 3.16 branch:
>
> http://public.kitware.com/cgi-bin/viewcvs.cgi/Code/IO/itkGDCMImageIO.cxx?r1=1.161&r2=1.161.2.1&pathrev=ITK-3-16&sortby=date&root=Insight
>
>
> Indeed, it is a very serious bug...
>
>
>    Thanks
>
>
>          Luis
>
>
> -----------------------------------------------------------------------------
> On Wed, Dec 2, 2009 at 1:15 PM, Bill Lorensen <[hidden email]> wrote:
>> Luis,
>>
>> There is a serious bug in itkGDCMImageIO that was fixed post itk 3.16
>> release. It is described here:
>>
>> http://www.cmake.org/Bug/view.php?id=7748
>>
>> and the fix is here:
>>
>> http://public.kitware.com/cgi-bin/viewcvs.cgi/Code/IO/itkGDCMImageIO.cxx?root=Insight&r1=1.161&r2=1.162
>>
>> Can you apply this to itk 3.16? Slicer3 is currently using 3.16, so
>> they will benefit from the change.
>>
>> The bug cause the incorrect orientation to be written to DICOM files.
>> I think it has always been there.
>>
>> Bill
>>
>
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Slicer does not start on Windows if installed from a recent trunk version

lasso
Hi all,

I generated an installation package from Slicer trunk revision 11028 (Nov.
23) and tried to install it on Windows XP. The installation was completed
successfully, but after clicking on Slicer in the start menu, the splash
window came up for a moment, then disappeared and the application did not
start.

I've downloaded a few nightly releases, installed them, and tested if it
worked. I've found the followings:
Slicer3-3.5-alpha-2009-10-01-win32.exe - worked correctly (Slicer started)
Slicer3-3.5-alpha-2009-11-01-win32.exe - worked correctly (Slicer started)
Slicer3-3.5-alpha-2009-12-01-win32.exe - Slicer didn't start (just splash
window appeared then disappeared)
Slicer3-3.5-alpha-2009-12-09-win32.exe - Slicer didn't start (just splash
window appeared then disappeared)

I tried copying all the dlls in various places in the installation directory
tree to Slicer3-real.exe's directory. After this Slicer started, so it seems
to be a dll loading problem.

I've checked the environment variables that were generated by Slicer3.exe
for Slicer3-real.exe and found that many directories were incorrect (pointed
to C:/Slicer3-lib/... instead of C:/Program Files/Slicer3 3.5
2009-12-09/...), see details below.

Could you please check what could cause this problem?

thanks
Andras



BATCHMAKE_BIN_DIR=C:/Slicer3-lib/BatchMake-build/bin
BATCHMAKE_DIR=C:/Slicer3-lib/BatchMake-build
BATCHMAKE_LIB_DIR=C:/Slicer3-lib/BatchMake-build/bin
bmModuleDescriptionParser_DIR=C:/Slicer3-lib/BatchMake-build/bin
FreeSurfer_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
IGT_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
ITK_AUTOLOAD_PATH=C:/PROGRA~1/SLICER~1.200/lib/Slicer3/ITKFactories
ITK_BIN_DIR=C:/Slicer3-lib/Insight-build/bin
ITKCommandIO_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
KWWidgets_BIN_DIR=C:/Slicer3-lib/KWWidgets-build/bin
KWWidgets_DIR=C:/Slicer3-lib/KWWidgets-build
KWWidgets_LIB_DIR=C:/Slicer3-lib/KWWidgets-build/bin
LoadableModule_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
MGHImageIO_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
ModuleDescriptionParser_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
MRML_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
MRMLIDImageIO_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
OpenIGTLink_BIN_DIR=C:/Slicer3-lib/OpenIGTLink-build/bin
OpenIGTLink_DIR=C:/Slicer3-lib/OpenIGTLink-build
OpenIGTLink_LIB_DIR=C:/Slicer3-lib/OpenIGTLink-build/bin
PYTHON_DIR=C:/Slicer3-lib/python-build/PCBuild/..
PYTHONHOME=C:/Slicer3-lib/python-build/PCBuild/..
PYTHONPATH=C:/Slicer3-lib/python-build/PCBuild/..lib/python2.6/site-packages
/numpy/lib;C:/Slicer3-lib/python-build/PCBuild/../lib/python2.6/lib-tk;C:/Sl
icer3-lib/...
Qdec_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
RemoteIO_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
Slicer3_BIN_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/bin
Slicer3_HOME=C:/PROGRA~1/SLICER~1.200
Slicer3_LIB_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
Slicer3_MODULES_DIR=C:/Program Files/Slicer3 3.5
2009-12-09/lib/Slicer3/Modules
Slicer3_PLUGINS_DIR=C:/Program Files/Slicer3 3.5
2009-12-09/lib/Slicer3/Plugins
Slicer3_VERSION=2009-12-09
SlicerIO_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
TCL_DIR=C:/Slicer3-lib/tcl-build
TCL_LIBRARY=C:/PROGRA~1/SLICER~1.200/lib/TclTk/lib/tcl8.4
tclap_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
TCLLIBPATH=C:/Slicer3-lib/tcl-build/lib/blt2.4
C:/Slicer3-lib/tcl-build/lib/iwidgets4.0.1 ...
Teem_DIR=C:/Slicer3-lib/teem-build/bin
TK_LIBRARY=C:/Slicer3-lib/tcl-build/lib/tk8.4
VTK_BIN_DIR=C:/Slicer3-lib/VTK-build/bin
VTK_DIR=C:/Slicer3-lib/VTK-build
vtkITK_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
vtkTeem_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
VU_LIBRARY=C:/PROGRA~1/SLICER~1.200/lib/TclTk/lib/vu2.2




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Re: Slicer does not start on Windows if installed from a recent trunk version

Dave Partyka
Is there a vtk.exe in the slicer install directory?

On Thu, Dec 10, 2009 at 1:08 PM, Andras Lasso <[hidden email]> wrote:
Hi all,

I generated an installation package from Slicer trunk revision 11028 (Nov.
23) and tried to install it on Windows XP. The installation was completed
successfully, but after clicking on Slicer in the start menu, the splash
window came up for a moment, then disappeared and the application did not
start.

I've downloaded a few nightly releases, installed them, and tested if it
worked. I've found the followings:
Slicer3-3.5-alpha-2009-10-01-win32.exe - worked correctly (Slicer started)
Slicer3-3.5-alpha-2009-11-01-win32.exe - worked correctly (Slicer started)
Slicer3-3.5-alpha-2009-12-01-win32.exe - Slicer didn't start (just splash
window appeared then disappeared)
Slicer3-3.5-alpha-2009-12-09-win32.exe - Slicer didn't start (just splash
window appeared then disappeared)

I tried copying all the dlls in various places in the installation directory
tree to Slicer3-real.exe's directory. After this Slicer started, so it seems
to be a dll loading problem.

I've checked the environment variables that were generated by Slicer3.exe
for Slicer3-real.exe and found that many directories were incorrect (pointed
to C:/Slicer3-lib/... instead of C:/Program Files/Slicer3 3.5
2009-12-09/...), see details below.

Could you please check what could cause this problem?

thanks
Andras



BATCHMAKE_BIN_DIR=C:/Slicer3-lib/BatchMake-build/bin
BATCHMAKE_DIR=C:/Slicer3-lib/BatchMake-build
BATCHMAKE_LIB_DIR=C:/Slicer3-lib/BatchMake-build/bin
bmModuleDescriptionParser_DIR=C:/Slicer3-lib/BatchMake-build/bin
FreeSurfer_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
IGT_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
ITK_AUTOLOAD_PATH=C:/PROGRA~1/SLICER~1.200/lib/Slicer3/ITKFactories
ITK_BIN_DIR=C:/Slicer3-lib/Insight-build/bin
ITKCommandIO_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
KWWidgets_BIN_DIR=C:/Slicer3-lib/KWWidgets-build/bin
KWWidgets_DIR=C:/Slicer3-lib/KWWidgets-build
KWWidgets_LIB_DIR=C:/Slicer3-lib/KWWidgets-build/bin
LoadableModule_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
MGHImageIO_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
ModuleDescriptionParser_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
MRML_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
MRMLIDImageIO_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
OpenIGTLink_BIN_DIR=C:/Slicer3-lib/OpenIGTLink-build/bin
OpenIGTLink_DIR=C:/Slicer3-lib/OpenIGTLink-build
OpenIGTLink_LIB_DIR=C:/Slicer3-lib/OpenIGTLink-build/bin
PYTHON_DIR=C:/Slicer3-lib/python-build/PCBuild/..
PYTHONHOME=C:/Slicer3-lib/python-build/PCBuild/..
PYTHONPATH=C:/Slicer3-lib/python-build/PCBuild/..lib/python2.6/site-packages
/numpy/lib;C:/Slicer3-lib/python-build/PCBuild/../lib/python2.6/lib-tk;C:/Sl
icer3-lib/...
Qdec_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
RemoteIO_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
Slicer3_BIN_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/bin
Slicer3_HOME=C:/PROGRA~1/SLICER~1.200
Slicer3_LIB_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
Slicer3_MODULES_DIR=C:/Program Files/Slicer3 3.5
2009-12-09/lib/Slicer3/Modules
Slicer3_PLUGINS_DIR=C:/Program Files/Slicer3 3.5
2009-12-09/lib/Slicer3/Plugins
Slicer3_VERSION=2009-12-09
SlicerIO_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
TCL_DIR=C:/Slicer3-lib/tcl-build
TCL_LIBRARY=C:/PROGRA~1/SLICER~1.200/lib/TclTk/lib/tcl8.4
tclap_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
TCLLIBPATH=C:/Slicer3-lib/tcl-build/lib/blt2.4
C:/Slicer3-lib/tcl-build/lib/iwidgets4.0.1 ...
Teem_DIR=C:/Slicer3-lib/teem-build/bin
TK_LIBRARY=C:/Slicer3-lib/tcl-build/lib/tk8.4
VTK_BIN_DIR=C:/Slicer3-lib/VTK-build/bin
VTK_DIR=C:/Slicer3-lib/VTK-build
vtkITK_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
vtkTeem_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
VU_LIBRARY=C:/PROGRA~1/SLICER~1.200/lib/TclTk/lib/vu2.2




_______________________________________________
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[hidden email]
http://massmail.spl.harvard.edu/mailman/listinfo/slicer-devel
To unsubscribe: send email to [hidden email] with unsubscribe as the subject


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[hidden email]
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To unsubscribe: send email to [hidden email] with unsubscribe as the subject
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Re: Slicer does not start on Windows if installed from a recent trunk version

lasso

Slicer3-3.5-alpha-2009-10-01-win32.exe - worked correctly => vtk.exe present
Slicer3-3.5-alpha-2009-11-01-win32.exe - worked correctly => vtk.exe present
Slicer3-3.5-alpha-2009-12-01-win32.exe - Slicer didn't start => no vtk.exe
Slicer3-3.5-alpha-2009-12-09-win32.exe - Slicer didn't start => no vtk.exe

When I copied vtk.exe to the bin directory it fixed the problem!

 

Do you have an idea when this missing vtk.exe problem will be fixed?

 

Andras

 

 

From: Dave Partyka [mailto:[hidden email]]
Sent: Thursday, December 10, 2009 1:13 PM
To: Andras Lasso
Cc: [hidden email]
Subject: Re: [slicer-devel] Slicer does not start on Windows if installed from a recent trunk version

 

Is there a vtk.exe in the slicer install directory?

On Thu, Dec 10, 2009 at 1:08 PM, Andras Lasso <[hidden email]> wrote:

Hi all,

I generated an installation package from Slicer trunk revision 11028 (Nov.
23) and tried to install it on Windows XP. The installation was completed
successfully, but after clicking on Slicer in the start menu, the splash
window came up for a moment, then disappeared and the application did not
start.

I've downloaded a few nightly releases, installed them, and tested if it
worked. I've found the followings:
Slicer3-3.5-alpha-2009-10-01-win32.exe - worked correctly (Slicer started)
Slicer3-3.5-alpha-2009-11-01-win32.exe - worked correctly (Slicer started)
Slicer3-3.5-alpha-2009-12-01-win32.exe - Slicer didn't start (just splash
window appeared then disappeared)
Slicer3-3.5-alpha-2009-12-09-win32.exe - Slicer didn't start (just splash
window appeared then disappeared)

I tried copying all the dlls in various places in the installation directory
tree to Slicer3-real.exe's directory. After this Slicer started, so it seems
to be a dll loading problem.

I've checked the environment variables that were generated by Slicer3.exe
for Slicer3-real.exe and found that many directories were incorrect (pointed
to C:/Slicer3-lib/... instead of C:/Program Files/Slicer3 3.5
2009-12-09/...), see details below.

Could you please check what could cause this problem?

thanks
Andras



BATCHMAKE_BIN_DIR=C:/Slicer3-lib/BatchMake-build/bin
BATCHMAKE_DIR=C:/Slicer3-lib/BatchMake-build
BATCHMAKE_LIB_DIR=C:/Slicer3-lib/BatchMake-build/bin
bmModuleDescriptionParser_DIR=C:/Slicer3-lib/BatchMake-build/bin
FreeSurfer_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
IGT_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
ITK_AUTOLOAD_PATH=C:/PROGRA~1/SLICER~1.200/lib/Slicer3/ITKFactories
ITK_BIN_DIR=C:/Slicer3-lib/Insight-build/bin
ITKCommandIO_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
KWWidgets_BIN_DIR=C:/Slicer3-lib/KWWidgets-build/bin
KWWidgets_DIR=C:/Slicer3-lib/KWWidgets-build
KWWidgets_LIB_DIR=C:/Slicer3-lib/KWWidgets-build/bin
LoadableModule_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
MGHImageIO_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
ModuleDescriptionParser_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
MRML_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
MRMLIDImageIO_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
OpenIGTLink_BIN_DIR=C:/Slicer3-lib/OpenIGTLink-build/bin
OpenIGTLink_DIR=C:/Slicer3-lib/OpenIGTLink-build
OpenIGTLink_LIB_DIR=C:/Slicer3-lib/OpenIGTLink-build/bin
PYTHON_DIR=C:/Slicer3-lib/python-build/PCBuild/..
PYTHONHOME=C:/Slicer3-lib/python-build/PCBuild/..
PYTHONPATH=C:/Slicer3-lib/python-build/PCBuild/..lib/python2.6/site-packages
/numpy/lib;C:/Slicer3-lib/python-build/PCBuild/../lib/python2.6/lib-tk;C:/Sl
icer3-lib/...
Qdec_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
RemoteIO_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
Slicer3_BIN_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/bin
Slicer3_HOME=C:/PROGRA~1/SLICER~1.200
Slicer3_LIB_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
Slicer3_MODULES_DIR=C:/Program Files/Slicer3 3.5
2009-12-09/lib/Slicer3/Modules
Slicer3_PLUGINS_DIR=C:/Program Files/Slicer3 3.5
2009-12-09/lib/Slicer3/Plugins
Slicer3_VERSION=2009-12-09
SlicerIO_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
TCL_DIR=C:/Slicer3-lib/tcl-build
TCL_LIBRARY=C:/PROGRA~1/SLICER~1.200/lib/TclTk/lib/tcl8.4
tclap_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
TCLLIBPATH=C:/Slicer3-lib/tcl-build/lib/blt2.4
C:/Slicer3-lib/tcl-build/lib/iwidgets4.0.1 ...
Teem_DIR=C:/Slicer3-lib/teem-build/bin
TK_LIBRARY=C:/Slicer3-lib/tcl-build/lib/tk8.4
VTK_BIN_DIR=C:/Slicer3-lib/VTK-build/bin
VTK_DIR=C:/Slicer3-lib/VTK-build
vtkITK_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
vtkTeem_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
VU_LIBRARY=C:/PROGRA~1/SLICER~1.200/lib/TclTk/lib/vu2.2




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To unsubscribe: send email to [hidden email] with unsubscribe as the subject

 


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Re: Slicer does not start on Windows if installed from a recent trunk version

Dave Partyka
I will try to track it down today.

On Thu, Dec 10, 2009 at 1:52 PM, Andras Lasso <[hidden email]> wrote:

Slicer3-3.5-alpha-2009-10-01-win32.exe - worked correctly => vtk.exe present
Slicer3-3.5-alpha-2009-11-01-win32.exe - worked correctly => vtk.exe present
Slicer3-3.5-alpha-2009-12-01-win32.exe - Slicer didn't start => no vtk.exe
Slicer3-3.5-alpha-2009-12-09-win32.exe - Slicer didn't start => no vtk.exe

When I copied vtk.exe to the bin directory it fixed the problem!

 

Do you have an idea when this missing vtk.exe problem will be fixed?

 

Andras

 

 

From: Dave Partyka [mailto:[hidden email]]
Sent: Thursday, December 10, 2009 1:13 PM
To: Andras Lasso
Cc: [hidden email]
Subject: Re: [slicer-devel] Slicer does not start on Windows if installed from a recent trunk version

 

Is there a vtk.exe in the slicer install directory?

On Thu, Dec 10, 2009 at 1:08 PM, Andras Lasso <[hidden email]> wrote:

Hi all,

I generated an installation package from Slicer trunk revision 11028 (Nov.
23) and tried to install it on Windows XP. The installation was completed
successfully, but after clicking on Slicer in the start menu, the splash
window came up for a moment, then disappeared and the application did not
start.

I've downloaded a few nightly releases, installed them, and tested if it
worked. I've found the followings:
Slicer3-3.5-alpha-2009-10-01-win32.exe - worked correctly (Slicer started)
Slicer3-3.5-alpha-2009-11-01-win32.exe - worked correctly (Slicer started)
Slicer3-3.5-alpha-2009-12-01-win32.exe - Slicer didn't start (just splash
window appeared then disappeared)
Slicer3-3.5-alpha-2009-12-09-win32.exe - Slicer didn't start (just splash
window appeared then disappeared)

I tried copying all the dlls in various places in the installation directory
tree to Slicer3-real.exe's directory. After this Slicer started, so it seems
to be a dll loading problem.

I've checked the environment variables that were generated by Slicer3.exe
for Slicer3-real.exe and found that many directories were incorrect (pointed
to C:/Slicer3-lib/... instead of C:/Program Files/Slicer3 3.5
2009-12-09/...), see details below.

Could you please check what could cause this problem?

thanks
Andras



BATCHMAKE_BIN_DIR=C:/Slicer3-lib/BatchMake-build/bin
BATCHMAKE_DIR=C:/Slicer3-lib/BatchMake-build
BATCHMAKE_LIB_DIR=C:/Slicer3-lib/BatchMake-build/bin
bmModuleDescriptionParser_DIR=C:/Slicer3-lib/BatchMake-build/bin
FreeSurfer_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
IGT_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
ITK_AUTOLOAD_PATH=C:/PROGRA~1/SLICER~1.200/lib/Slicer3/ITKFactories
ITK_BIN_DIR=C:/Slicer3-lib/Insight-build/bin
ITKCommandIO_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
KWWidgets_BIN_DIR=C:/Slicer3-lib/KWWidgets-build/bin
KWWidgets_DIR=C:/Slicer3-lib/KWWidgets-build
KWWidgets_LIB_DIR=C:/Slicer3-lib/KWWidgets-build/bin
LoadableModule_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
MGHImageIO_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
ModuleDescriptionParser_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
MRML_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
MRMLIDImageIO_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
OpenIGTLink_BIN_DIR=C:/Slicer3-lib/OpenIGTLink-build/bin
OpenIGTLink_DIR=C:/Slicer3-lib/OpenIGTLink-build
OpenIGTLink_LIB_DIR=C:/Slicer3-lib/OpenIGTLink-build/bin
PYTHON_DIR=C:/Slicer3-lib/python-build/PCBuild/..
PYTHONHOME=C:/Slicer3-lib/python-build/PCBuild/..
PYTHONPATH=C:/Slicer3-lib/python-build/PCBuild/..lib/python2.6/site-packages
/numpy/lib;C:/Slicer3-lib/python-build/PCBuild/../lib/python2.6/lib-tk;C:/Sl
icer3-lib/...
Qdec_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
RemoteIO_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
Slicer3_BIN_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/bin
Slicer3_HOME=C:/PROGRA~1/SLICER~1.200
Slicer3_LIB_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
Slicer3_MODULES_DIR=C:/Program Files/Slicer3 3.5
2009-12-09/lib/Slicer3/Modules
Slicer3_PLUGINS_DIR=C:/Program Files/Slicer3 3.5
2009-12-09/lib/Slicer3/Plugins
Slicer3_VERSION=2009-12-09
SlicerIO_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
TCL_DIR=C:/Slicer3-lib/tcl-build
TCL_LIBRARY=C:/PROGRA~1/SLICER~1.200/lib/TclTk/lib/tcl8.4
tclap_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
TCLLIBPATH=C:/Slicer3-lib/tcl-build/lib/blt2.4
C:/Slicer3-lib/tcl-build/lib/iwidgets4.0.1 ...
Teem_DIR=C:/Slicer3-lib/teem-build/bin
TK_LIBRARY=C:/Slicer3-lib/tcl-build/lib/tk8.4
VTK_BIN_DIR=C:/Slicer3-lib/VTK-build/bin
VTK_DIR=C:/Slicer3-lib/VTK-build
vtkITK_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
vtkTeem_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
VU_LIBRARY=C:/PROGRA~1/SLICER~1.200/lib/TclTk/lib/vu2.2




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Re: Slicer does not start on Windows if installed from a recent trunk version

Dave Partyka
Okay the fix for this is committed and should show up in tomorrows build.

On Thu, Dec 10, 2009 at 2:22 PM, Dave Partyka <[hidden email]> wrote:
I will try to track it down today.


On Thu, Dec 10, 2009 at 1:52 PM, Andras Lasso <[hidden email]> wrote:

Slicer3-3.5-alpha-2009-10-01-win32.exe - worked correctly => vtk.exe present
Slicer3-3.5-alpha-2009-11-01-win32.exe - worked correctly => vtk.exe present
Slicer3-3.5-alpha-2009-12-01-win32.exe - Slicer didn't start => no vtk.exe
Slicer3-3.5-alpha-2009-12-09-win32.exe - Slicer didn't start => no vtk.exe

When I copied vtk.exe to the bin directory it fixed the problem!

 

Do you have an idea when this missing vtk.exe problem will be fixed?

 

Andras

 

 

From: Dave Partyka [mailto:[hidden email]]
Sent: Thursday, December 10, 2009 1:13 PM
To: Andras Lasso
Cc: [hidden email]
Subject: Re: [slicer-devel] Slicer does not start on Windows if installed from a recent trunk version

 

Is there a vtk.exe in the slicer install directory?

On Thu, Dec 10, 2009 at 1:08 PM, Andras Lasso <[hidden email]> wrote:

Hi all,

I generated an installation package from Slicer trunk revision 11028 (Nov.
23) and tried to install it on Windows XP. The installation was completed
successfully, but after clicking on Slicer in the start menu, the splash
window came up for a moment, then disappeared and the application did not
start.

I've downloaded a few nightly releases, installed them, and tested if it
worked. I've found the followings:
Slicer3-3.5-alpha-2009-10-01-win32.exe - worked correctly (Slicer started)
Slicer3-3.5-alpha-2009-11-01-win32.exe - worked correctly (Slicer started)
Slicer3-3.5-alpha-2009-12-01-win32.exe - Slicer didn't start (just splash
window appeared then disappeared)
Slicer3-3.5-alpha-2009-12-09-win32.exe - Slicer didn't start (just splash
window appeared then disappeared)

I tried copying all the dlls in various places in the installation directory
tree to Slicer3-real.exe's directory. After this Slicer started, so it seems
to be a dll loading problem.

I've checked the environment variables that were generated by Slicer3.exe
for Slicer3-real.exe and found that many directories were incorrect (pointed
to C:/Slicer3-lib/... instead of C:/Program Files/Slicer3 3.5
2009-12-09/...), see details below.

Could you please check what could cause this problem?

thanks
Andras



BATCHMAKE_BIN_DIR=C:/Slicer3-lib/BatchMake-build/bin
BATCHMAKE_DIR=C:/Slicer3-lib/BatchMake-build
BATCHMAKE_LIB_DIR=C:/Slicer3-lib/BatchMake-build/bin
bmModuleDescriptionParser_DIR=C:/Slicer3-lib/BatchMake-build/bin
FreeSurfer_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
IGT_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
ITK_AUTOLOAD_PATH=C:/PROGRA~1/SLICER~1.200/lib/Slicer3/ITKFactories
ITK_BIN_DIR=C:/Slicer3-lib/Insight-build/bin
ITKCommandIO_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
KWWidgets_BIN_DIR=C:/Slicer3-lib/KWWidgets-build/bin
KWWidgets_DIR=C:/Slicer3-lib/KWWidgets-build
KWWidgets_LIB_DIR=C:/Slicer3-lib/KWWidgets-build/bin
LoadableModule_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
MGHImageIO_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
ModuleDescriptionParser_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
MRML_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
MRMLIDImageIO_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
OpenIGTLink_BIN_DIR=C:/Slicer3-lib/OpenIGTLink-build/bin
OpenIGTLink_DIR=C:/Slicer3-lib/OpenIGTLink-build
OpenIGTLink_LIB_DIR=C:/Slicer3-lib/OpenIGTLink-build/bin
PYTHON_DIR=C:/Slicer3-lib/python-build/PCBuild/..
PYTHONHOME=C:/Slicer3-lib/python-build/PCBuild/..
PYTHONPATH=C:/Slicer3-lib/python-build/PCBuild/..lib/python2.6/site-packages
/numpy/lib;C:/Slicer3-lib/python-build/PCBuild/../lib/python2.6/lib-tk;C:/Sl
icer3-lib/...
Qdec_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
RemoteIO_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
Slicer3_BIN_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/bin
Slicer3_HOME=C:/PROGRA~1/SLICER~1.200
Slicer3_LIB_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
Slicer3_MODULES_DIR=C:/Program Files/Slicer3 3.5
2009-12-09/lib/Slicer3/Modules
Slicer3_PLUGINS_DIR=C:/Program Files/Slicer3 3.5
2009-12-09/lib/Slicer3/Plugins
Slicer3_VERSION=2009-12-09
SlicerIO_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
TCL_DIR=C:/Slicer3-lib/tcl-build
TCL_LIBRARY=C:/PROGRA~1/SLICER~1.200/lib/TclTk/lib/tcl8.4
tclap_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
TCLLIBPATH=C:/Slicer3-lib/tcl-build/lib/blt2.4
C:/Slicer3-lib/tcl-build/lib/iwidgets4.0.1 ...
Teem_DIR=C:/Slicer3-lib/teem-build/bin
TK_LIBRARY=C:/Slicer3-lib/tcl-build/lib/tk8.4
VTK_BIN_DIR=C:/Slicer3-lib/VTK-build/bin
VTK_DIR=C:/Slicer3-lib/VTK-build
vtkITK_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
vtkTeem_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
VU_LIBRARY=C:/PROGRA~1/SLICER~1.200/lib/TclTk/lib/vu2.2




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To unsubscribe: send email to [hidden email] with unsubscribe as the subject

 




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Re: Slicer does not start on Windows if installed from a recent trunk version

lasso

Thank you Dave, I've tested and now it works well.

Andras

 

From: Dave Partyka [mailto:[hidden email]]
Sent: December-10-09 9:04 PM
To: Andras Lasso
Cc: [hidden email]
Subject: Re: [slicer-devel] Slicer does not start on Windows if installed from a recent trunk version

 

Okay the fix for this is committed and should show up in tomorrows build.

On Thu, Dec 10, 2009 at 2:22 PM, Dave Partyka <[hidden email]> wrote:

I will try to track it down today.

 

On Thu, Dec 10, 2009 at 1:52 PM, Andras Lasso <[hidden email]> wrote:

Slicer3-3.5-alpha-2009-10-01-win32.exe - worked correctly => vtk.exe present
Slicer3-3.5-alpha-2009-11-01-win32.exe - worked correctly => vtk.exe present
Slicer3-3.5-alpha-2009-12-01-win32.exe - Slicer didn't start => no vtk.exe
Slicer3-3.5-alpha-2009-12-09-win32.exe - Slicer didn't start => no vtk.exe

When I copied vtk.exe to the bin directory it fixed the problem!

 

Do you have an idea when this missing vtk.exe problem will be fixed?

 

Andras

 

 

From: Dave Partyka [mailto:[hidden email]]
Sent: Thursday, December 10, 2009 1:13 PM
To: Andras Lasso
Cc: [hidden email]
Subject: Re: [slicer-devel] Slicer does not start on Windows if installed from a recent trunk version

 

Is there a vtk.exe in the slicer install directory?

On Thu, Dec 10, 2009 at 1:08 PM, Andras Lasso <[hidden email]> wrote:

Hi all,

I generated an installation package from Slicer trunk revision 11028 (Nov.
23) and tried to install it on Windows XP. The installation was completed
successfully, but after clicking on Slicer in the start menu, the splash
window came up for a moment, then disappeared and the application did not
start.

I've downloaded a few nightly releases, installed them, and tested if it
worked. I've found the followings:
Slicer3-3.5-alpha-2009-10-01-win32.exe - worked correctly (Slicer started)
Slicer3-3.5-alpha-2009-11-01-win32.exe - worked correctly (Slicer started)
Slicer3-3.5-alpha-2009-12-01-win32.exe - Slicer didn't start (just splash
window appeared then disappeared)
Slicer3-3.5-alpha-2009-12-09-win32.exe - Slicer didn't start (just splash
window appeared then disappeared)

I tried copying all the dlls in various places in the installation directory
tree to Slicer3-real.exe's directory. After this Slicer started, so it seems
to be a dll loading problem.

I've checked the environment variables that were generated by Slicer3.exe
for Slicer3-real.exe and found that many directories were incorrect (pointed
to C:/Slicer3-lib/... instead of C:/Program Files/Slicer3 3.5
2009-12-09/...), see details below.

Could you please check what could cause this problem?

thanks
Andras



BATCHMAKE_BIN_DIR=C:/Slicer3-lib/BatchMake-build/bin
BATCHMAKE_DIR=C:/Slicer3-lib/BatchMake-build
BATCHMAKE_LIB_DIR=C:/Slicer3-lib/BatchMake-build/bin
bmModuleDescriptionParser_DIR=C:/Slicer3-lib/BatchMake-build/bin
FreeSurfer_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
IGT_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
ITK_AUTOLOAD_PATH=C:/PROGRA~1/SLICER~1.200/lib/Slicer3/ITKFactories
ITK_BIN_DIR=C:/Slicer3-lib/Insight-build/bin
ITKCommandIO_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
KWWidgets_BIN_DIR=C:/Slicer3-lib/KWWidgets-build/bin
KWWidgets_DIR=C:/Slicer3-lib/KWWidgets-build
KWWidgets_LIB_DIR=C:/Slicer3-lib/KWWidgets-build/bin
LoadableModule_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
MGHImageIO_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
ModuleDescriptionParser_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
MRML_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
MRMLIDImageIO_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
OpenIGTLink_BIN_DIR=C:/Slicer3-lib/OpenIGTLink-build/bin
OpenIGTLink_DIR=C:/Slicer3-lib/OpenIGTLink-build
OpenIGTLink_LIB_DIR=C:/Slicer3-lib/OpenIGTLink-build/bin
PYTHON_DIR=C:/Slicer3-lib/python-build/PCBuild/..
PYTHONHOME=C:/Slicer3-lib/python-build/PCBuild/..
PYTHONPATH=C:/Slicer3-lib/python-build/PCBuild/..lib/python2.6/site-packages
/numpy/lib;C:/Slicer3-lib/python-build/PCBuild/../lib/python2.6/lib-tk;C:/Sl
icer3-lib/...
Qdec_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
RemoteIO_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
Slicer3_BIN_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/bin
Slicer3_HOME=C:/PROGRA~1/SLICER~1.200
Slicer3_LIB_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
Slicer3_MODULES_DIR=C:/Program Files/Slicer3 3.5
2009-12-09/lib/Slicer3/Modules
Slicer3_PLUGINS_DIR=C:/Program Files/Slicer3 3.5
2009-12-09/lib/Slicer3/Plugins
Slicer3_VERSION=2009-12-09
SlicerIO_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
TCL_DIR=C:/Slicer3-lib/tcl-build
TCL_LIBRARY=C:/PROGRA~1/SLICER~1.200/lib/TclTk/lib/tcl8.4
tclap_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
TCLLIBPATH=C:/Slicer3-lib/tcl-build/lib/blt2.4
C:/Slicer3-lib/tcl-build/lib/iwidgets4.0.1 ...
Teem_DIR=C:/Slicer3-lib/teem-build/bin
TK_LIBRARY=C:/Slicer3-lib/tcl-build/lib/tk8.4
VTK_BIN_DIR=C:/Slicer3-lib/VTK-build/bin
VTK_DIR=C:/Slicer3-lib/VTK-build
vtkITK_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
vtkTeem_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
VU_LIBRARY=C:/PROGRA~1/SLICER~1.200/lib/TclTk/lib/vu2.2




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[hidden email]
http://massmail.spl.harvard.edu/mailman/listinfo/slicer-devel
To unsubscribe: send email to [hidden email] with unsubscribe as the subject

 

 

 


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Re: Slicer does not start on Windows if installed from a recent trunk version

Dave Partyka
Glad to hear :-)

On Fri, Dec 11, 2009 at 8:38 PM, Andras Lasso <[hidden email]> wrote:

Thank you Dave, I've tested and now it works well.

Andras

 

From: Dave Partyka [mailto:[hidden email]]
Sent: December-10-09 9:04 PM


To: Andras Lasso
Cc: [hidden email]
Subject: Re: [slicer-devel] Slicer does not start on Windows if installed from a recent trunk version

 

Okay the fix for this is committed and should show up in tomorrows build.

On Thu, Dec 10, 2009 at 2:22 PM, Dave Partyka <[hidden email]> wrote:

I will try to track it down today.

 

On Thu, Dec 10, 2009 at 1:52 PM, Andras Lasso <[hidden email]> wrote:

Slicer3-3.5-alpha-2009-10-01-win32.exe - worked correctly => vtk.exe present
Slicer3-3.5-alpha-2009-11-01-win32.exe - worked correctly => vtk.exe present
Slicer3-3.5-alpha-2009-12-01-win32.exe - Slicer didn't start => no vtk.exe
Slicer3-3.5-alpha-2009-12-09-win32.exe - Slicer didn't start => no vtk.exe

When I copied vtk.exe to the bin directory it fixed the problem!

 

Do you have an idea when this missing vtk.exe problem will be fixed?

 

Andras

 

 

From: Dave Partyka [mailto:[hidden email]]
Sent: Thursday, December 10, 2009 1:13 PM
To: Andras Lasso
Cc: [hidden email]
Subject: Re: [slicer-devel] Slicer does not start on Windows if installed from a recent trunk version

 

Is there a vtk.exe in the slicer install directory?

On Thu, Dec 10, 2009 at 1:08 PM, Andras Lasso <[hidden email]> wrote:

Hi all,

I generated an installation package from Slicer trunk revision 11028 (Nov.
23) and tried to install it on Windows XP. The installation was completed
successfully, but after clicking on Slicer in the start menu, the splash
window came up for a moment, then disappeared and the application did not
start.

I've downloaded a few nightly releases, installed them, and tested if it
worked. I've found the followings:
Slicer3-3.5-alpha-2009-10-01-win32.exe - worked correctly (Slicer started)
Slicer3-3.5-alpha-2009-11-01-win32.exe - worked correctly (Slicer started)
Slicer3-3.5-alpha-2009-12-01-win32.exe - Slicer didn't start (just splash
window appeared then disappeared)
Slicer3-3.5-alpha-2009-12-09-win32.exe - Slicer didn't start (just splash
window appeared then disappeared)

I tried copying all the dlls in various places in the installation directory
tree to Slicer3-real.exe's directory. After this Slicer started, so it seems
to be a dll loading problem.

I've checked the environment variables that were generated by Slicer3.exe
for Slicer3-real.exe and found that many directories were incorrect (pointed
to C:/Slicer3-lib/... instead of C:/Program Files/Slicer3 3.5
2009-12-09/...), see details below.

Could you please check what could cause this problem?

thanks
Andras



BATCHMAKE_BIN_DIR=C:/Slicer3-lib/BatchMake-build/bin
BATCHMAKE_DIR=C:/Slicer3-lib/BatchMake-build
BATCHMAKE_LIB_DIR=C:/Slicer3-lib/BatchMake-build/bin
bmModuleDescriptionParser_DIR=C:/Slicer3-lib/BatchMake-build/bin
FreeSurfer_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
IGT_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
ITK_AUTOLOAD_PATH=C:/PROGRA~1/SLICER~1.200/lib/Slicer3/ITKFactories
ITK_BIN_DIR=C:/Slicer3-lib/Insight-build/bin
ITKCommandIO_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
KWWidgets_BIN_DIR=C:/Slicer3-lib/KWWidgets-build/bin
KWWidgets_DIR=C:/Slicer3-lib/KWWidgets-build
KWWidgets_LIB_DIR=C:/Slicer3-lib/KWWidgets-build/bin
LoadableModule_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
MGHImageIO_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
ModuleDescriptionParser_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
MRML_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
MRMLIDImageIO_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
OpenIGTLink_BIN_DIR=C:/Slicer3-lib/OpenIGTLink-build/bin
OpenIGTLink_DIR=C:/Slicer3-lib/OpenIGTLink-build
OpenIGTLink_LIB_DIR=C:/Slicer3-lib/OpenIGTLink-build/bin
PYTHON_DIR=C:/Slicer3-lib/python-build/PCBuild/..
PYTHONHOME=C:/Slicer3-lib/python-build/PCBuild/..
PYTHONPATH=C:/Slicer3-lib/python-build/PCBuild/..lib/python2.6/site-packages
/numpy/lib;C:/Slicer3-lib/python-build/PCBuild/../lib/python2.6/lib-tk;C:/Sl
icer3-lib/...
Qdec_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
RemoteIO_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
Slicer3_BIN_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/bin
Slicer3_HOME=C:/PROGRA~1/SLICER~1.200
Slicer3_LIB_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
Slicer3_MODULES_DIR=C:/Program Files/Slicer3 3.5
2009-12-09/lib/Slicer3/Modules
Slicer3_PLUGINS_DIR=C:/Program Files/Slicer3 3.5
2009-12-09/lib/Slicer3/Plugins
Slicer3_VERSION=2009-12-09
SlicerIO_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
TCL_DIR=C:/Slicer3-lib/tcl-build
TCL_LIBRARY=C:/PROGRA~1/SLICER~1.200/lib/TclTk/lib/tcl8.4
tclap_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
TCLLIBPATH=C:/Slicer3-lib/tcl-build/lib/blt2.4
C:/Slicer3-lib/tcl-build/lib/iwidgets4.0.1 ...
Teem_DIR=C:/Slicer3-lib/teem-build/bin
TK_LIBRARY=C:/Slicer3-lib/tcl-build/lib/tk8.4
VTK_BIN_DIR=C:/Slicer3-lib/VTK-build/bin
VTK_DIR=C:/Slicer3-lib/VTK-build
vtkITK_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
vtkTeem_DIR=C:/Program Files/Slicer3 3.5 2009-12-09/lib
VU_LIBRARY=C:/PROGRA~1/SLICER~1.200/lib/TclTk/lib/vu2.2




_______________________________________________
slicer-devel mailing list
[hidden email]
http://massmail.spl.harvard.edu/mailman/listinfo/slicer-devel
To unsubscribe: send email to [hidden email] with unsubscribe as the subject

 

 

 



_______________________________________________
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[hidden email]
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To unsubscribe: send email to [hidden email] with unsubscribe as the subject